Dog - Boxer assembly and gene annotation

Name: Ensembl Dog - Boxer Variation Data
License: https://www.apache.org/licenses/LICENSE-2.0
Keywords: SNP, polymorphism, insertion, deletion, CNV, copy number variant

Assembly

Gene annotation

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

Assembly	Dog10K_Boxer_Tasha, INSDC Assembly GCA_000002285.4, Jun 2020
Base Pairs	2,312,785,471
Golden Path Length	2,312,785,471
Annotation provider	Ensembl
Annotation method	Full genebuild
Genebuild started	Oct 2020
Genebuild released
Genebuild last updated/patched	Oct 2020
Database version	113.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	19,843
Non coding genes	9,659
Small non coding genes	3,286
Long non coding genes	6,352
Misc non coding genes	21
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	491
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	53,114

Other

Genscan gene predictions	47,489
Short Variants	35,718,177
Structural variants	104,982

Dog - Boxer assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

Other

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Dog - Boxer assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

Other

About Us

Get help

Our sister sites

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