Assembly
The Felis_catus_9.0 assembly was submitted by Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine and last updated on 2019-11-21. The assembly is on the chromosome level, consisting of 4908 contigs assembled into 4524 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 41915695 while the scaffold N50 is 83967707.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | Felis_catus_9.0, INSDC Assembly GCA_000181335.4, Nov 2017 |
Base Pairs | 2,521,863,845 |
Golden Path Length | 2,521,863,845 |
Annotation provider | Ensembl |
Annotation method | Full genebuild |
Genebuild started | Jan 2018 |
Genebuild released | Jun 2018 |
Genebuild last updated/patched | Sep 2020 |
Database version | 114.9 |
Gene counts
Coding genes | 19,588 |
Non coding genes | 9,468 |
Small non coding genes | 2,622 |
Long non coding genes | 6,818 |
Misc non coding genes | 28 |
Pseudogenes | 494 |
Gene transcripts | 54,456 |
Other
Genscan gene predictions | 53,502 |
Short Variants | 3,259,957 |