Mouse (GRCm39)

Runtime Error in component "EnsEMBL::Web::Component::Info::SpeciesBlurb [content]"

Function EnsEMBL::Web::Component::Info::SpeciesBlurb fails to execute due to the following error:


	-------------------- EXCEPTION --------------------
	MSG: Could not connect to database mus_musculus_core_111_39 as user ensro using
	... [DBI:mysql:database=mus_musculus_core_111_39;host=127.0.0.1;port=5306] as a locator:
	DBI connect('database=mus_musculus_core_111_39;host=127.0.0.1;port=5306','ensro',...) failed: Lost connection
	... to MySQL server at 'reading initial communication packet', system error: 0 at
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm line 260.

	STACK Bio::EnsEMBL::DBSQL::DBConnection::connect
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm:276
	STACK Bio::EnsEMBL::DBSQL::DBConnection::db_handle
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm:673
	STACK Bio::EnsEMBL::DBSQL::DBConnection::prepare
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm:701
	STACK Bio::EnsEMBL::DBSQL::BaseAdaptor::prepare
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm:175
	STACK Bio::EnsEMBL::DBSQL::BaseMetaContainer::list_value_by_key
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm:123
	STACK Bio::EnsEMBL::DBSQL::BaseMetaContainer::get_schema_version
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm:78
	STACK Bio::EnsEMBL::Registry::version_check
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/Registry.pm:2909
	STACK Bio::EnsEMBL::Registry::get_adaptor
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/Registry.pm:1186
	STACK Bio::EnsEMBL::DBSQL::DBAdaptor::AUTOLOAD
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm:987
	STACK EnsEMBL::Web::Component::Shared::species_stats
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Component/Shared.pm:39
	STACK EnsEMBL::Web::Component::Info::SpeciesBlurb::column_right
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Component/Info/SpeciesBlurb.pm:
	... 119
	STACK EnsEMBL::Web::Component::Info::SpeciesBlurb::content
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Component/Info/SpeciesBlurb.pm:
	... 51
	STACK EnsEMBL::Web::Component::get_content
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Component.pm:268
	STACK (eval) /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Document/Panel.pm:435
	STACK EnsEMBL::Web::Document::Panel::component_content
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Document/Panel.pm:432
	STACK EnsEMBL::Web::Document::Panel::content
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Document/Panel.pm:330
	STACK EnsEMBL::Web::Document::Element::Content::content
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Document/Element/Content.pm:142
	STACK EnsEMBL::Web::Controller::render_page
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm:468
	STACK EnsEMBL::Web::Controller::Page::render_page
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Controller/Page.pm:81
	STACK EnsEMBL::Web::Controller::Page::init
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Controller/Page.pm:74
	STACK EnsEMBL::Web::Controller::__ANON__
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm:112
	STACK (eval) /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Exceptions::try
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Controller::process
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Controller.pm:115
	STACK EnsEMBL::Web::Apache::SpeciesHandler::__ANON__
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Apache/SpeciesHandler.pm:103
	STACK (eval) /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Exceptions::try
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Apache::SpeciesHandler::handler
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Apache/SpeciesHandler.pm:107
	STACK EnsEMBL::Web::Apache::Handlers::__ANON__
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Apache/Handlers.pm:531
	STACK (eval) /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Exceptions::try
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Exceptions.pm:62
	STACK EnsEMBL::Web::Apache::Handlers::handler
	... /nfs/public/ro/ensweb/live/mart/www_111/ensembl-webcode/modules/EnsEMBL/Web/Apache/Handlers.pm:535
	STACK (eval) -e:0
	STACK toplevel -e:0
	Date (localtime)    = Sat May  4 10:22:28 2024
	Ensembl API version = 111
	---------------------------------------------------