Atlantic salmon - European origin ALTA assembly and gene annotation

Name: Ensembl Atlantic salmon - European origin ALTA Gene Set
Creator: Ensembl
License: https://www.apache.org/licenses/LICENSE-2.0
Keywords: genebuild, transcripts, transcription, alignment, loci

Assembly

Gene annotation

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

Assembly	Ssal_ALTA, INSDC Assembly GCA_931346935.2, May 2022
Base Pairs	2,621,787,693
Golden Path Length	2,621,787,693
Annotation provider	Ensembl
Annotation method	Full genebuild
Genebuild started	Jun 2022
Genebuild released	Oct 2023
Genebuild last updated/patched	Oct 2022
Database version	112.2

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	42,434
Non coding genes	2,495
Small non coding genes	2,388
Long non coding genes	40
Misc non coding genes	67
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	850
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	73,501

Atlantic salmon - European origin ALTA assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Atlantic salmon - European origin ALTA assembly and gene annotation

Assembly

Gene annotation

More information

Statistics

Summary

Gene counts

About Us

Get help

Our sister sites

Follow us