Human self-Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Human (Homo sapiens, GRCh38) were extracted from their pairwise alignment in Ensembl release 76. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 285 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 2,740,219,882 out of 3,096,649,726
Covered: 356,429,844 out of 3,096,649,726

Uncovered: 30,585,675 out of 35,628,222
Covered: 5,042,547 out of 35,628,222