Chicken vs Common wall lizard Synteny results
The syntenic regions between Chicken (Gallus gallus, bGalGal1.mat.broiler.GRCg7b) and Common wall lizard (Podarcis muralis, PodMur_1.0) were extracted from their pairwise alignment in Ensembl release 107. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 310 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Chicken |
Uncovered: 104,887,906 out of 1,053,332,251 |
Uncovered: 5,178,517 out of 31,304,036 |
| Common wall lizard |
Uncovered: 247,916,283 out of 1,511,002,858 |
Uncovered: 8,862,273 out of 37,562,069 |