Cattle - Tuli (UOA_Tuli_1)

Cattle - Tuli assembly and gene annotation

Assembly

The UOA_Tuli_1 assembly was submitted by University of Adelaide and last updated on 2024-08-16. The assembly is on the chromosome level, consisting of 909 contigs assembled into 878 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 95916531 while the scaffold N50 is 101409388.

Gene annotation

Genome annotation was generated using the Ensembl vertebrate annotation pipeline.

In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyUOA_Tuli_1, INSDC Assembly GCA_040285425.1, Jun 2024
Base Pairs3,034,194,426
Golden Path Length3,034,194,426
Annotation providerEnsembl
Annotation methodFull genebuild
Genebuild startedJul 2024
Genebuild released
Genebuild last updated/patchedNov 2024
Database version115.1

Gene counts

Coding genes20,428
Non coding genes20,178
Small non coding genes6,964
Long non coding genes13,192
Misc non coding genes22
Pseudogenes355
Gene transcripts86,970