Goat - Saanen Dairy (Saanen_v1)

Goat - Saanen Dairy assembly and gene annotation

Assembly

The Saanen_v1 assembly was submitted by Northwest A&F University and last updated on 2023-01-27. The assembly is on the chromosome level, consisting of 1531 contigs assembled into 1362 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 46208332 while the scaffold N50 is 102383509.

Gene annotation

Genome annotation was generated using the Ensembl vertebrate annotation pipeline.

In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblySaanen_v1, INSDC Assembly GCA_015443085.1, Nov 2020
Base Pairs2,696,234,923
Golden Path Length2,696,234,923
Annotation providerEnsembl
Annotation methodFull genebuild
Genebuild startedAug 2023
Genebuild released
Genebuild last updated/patchedNov 2023
Database version116.1

Gene counts

Coding genes23,025
Non coding genes8,598
Small non coding genes2,278
Long non coding genes6,301
Misc non coding genes19
Pseudogenes543
Gene transcripts65,877