Assembly
The GRCg6a assembly was submitted by Genome Reference Consortium and last updated on 2018-12-05. The assembly is on the chromosome level, consisting of 1402 contigs assembled into 524 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 17655422 while the scaffold N50 is 20785086.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | GRCg6a, INSDC Assembly GCA_000002315.5, Mar 2018 |
| Base Pairs | 1,065,365,425 |
| Golden Path Length | 1,065,365,425 |
| Annotation provider | Ensembl |
| Annotation method | Full genebuild |
| Genebuild started | Sep 2021 |
| Genebuild released | |
| Genebuild last updated/patched | Jan 2022 |
| Database version | 116.6 |
Gene counts
| Coding genes | 17,077 |
| Non coding genes | 13,729 |
| Small non coding genes | 1,275 |
| Long non coding genes | 12,449 |
| Misc non coding genes | 5 |
| Pseudogenes | 56 |
| Gene transcripts | 74,296 |
Other
| Short Variants | 26,022,125 |
