Assembly
The SYL assembly was submitted by Institute of Ecology and Evolution and last updated on 2019-06-11. The assembly is on the scaffold level, consisting of 35293 contigs assembled into 15853 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 32252 while the scaffold N50 is 401650.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | SYL, INSDC Assembly GCA_006232285.1, Jun 2019 |
| Base Pairs | 431,811,987 |
| Golden Path Length | 431,811,987 |
| Annotation provider | Ensembl |
| Annotation method | Full genebuild |
| Genebuild started | Oct 2020 |
| Genebuild released | Jan 2021 |
| Genebuild last updated/patched | Oct 2020 |
| Database version | 116.1 |
Gene counts
| Coding genes | 20,778 |
| Non coding genes | 602 |
| Small non coding genes | 269 |
| Long non coding genes | 329 |
| Misc non coding genes | 4 |
| Pseudogenes | 223 |
| Gene transcripts | 56,505 |
Other
| Genscan gene predictions | 36,730 |
