Active tracks

Favourite tracks

Search results

Track order

    You have no favourite tracks. Use the star icon to add tracks to your favourites

    Sequence and assembly

    Enable/disable all Sequence
    • Contigs
      Track showing underlying assembly contigs.
    • Sequence
      Track showing sequence in both directions. Only displayed at 1Kb and below.
    Enable/disable all Simple features

      Genes and transcripts

      Enable/disable all Genes
      • Ensembl (Genes (Ensembl))
        This track comprises multiple analyses; Mitochondrial gene models imported from Genbank.; Annotation produced by the Ensembl genebuild.; Non-coding RNAs (ncRNAs) predicted using sequences from RFAM and miRBase. See article.

      Prediction transcripts

          mRNA and protein alignments

          • cDNA alignment
            Alignment of species-specific cDNAs to the genome.

          Variation

          Enable/disable all tracks
          • eva_oreochromis_niloticus_gca001858045v3 (Variants from EVA)
            Variants from EVA
          • nile_tilapia_EVA_PRJEB38548 (Variants from PRJEB38548)
            Variants from EVA study PRJEB38548

          Comparative genomics

          Enable/disable all Multiple alignments
            Enable/disable all Conservation regions
            • Constrained elements for 65 fish EPO-Extended (65 way GERP elements)
              GERP constrained elements based on the 65 fish EPO-Extended
            Enable/disable all BLASTz/LASTz alignments

              Repeat regions

              Enable/disable all tracks

                Information and decorations

                Enable/disable all tracks
                • Scale bar ()
                  Shows the scalebar
                • Ruler ()
                  Shows the length of the region being displayed
                • Variant Legend
                • Alignment Difference Legend
                • Gene Legend
                • Display in-track labels
                • Highlight current feature
                • Disabled track summary ()
                  Show counts of number of tracks turned off by the user
                • Information ()
                  Details of the region shown in the image

                Display options

                Looking for more data? Search the Trackhub Registry for external sources of annotation

                Key

                • Track style
                • Forward strand
                • Reverse strand
                • Favourite track
                • Track information
                • External data
                • User-added track

                Please note that the content of external tracks is not the responsibility of the Ensembl project.

                URL-based tracks may either slow down your ensembl browsing experience OR may be unavailable as these are served and stored from other servers elsewhere on the Internet.