Sheep - East friesian (NWAFU_Friesian_1.0)

Sheep - East friesian assembly and gene annotation

Assembly

The NWAFU_Friesian_1.0 assembly was submitted by Academy of Gansu Yuansheng Zhongxin Dairy Sheep Industry and last updated on 2021-06-09. The assembly is on the chromosome level, consisting of 972 contigs assembled into 937 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 85264699 while the scaffold N50 is 96203338.

Gene annotation

Genome annotation was generated using the Ensembl vertebrate annotation pipeline.

In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyNWAFU_Friesian_1.0, INSDC Assembly GCA_018804185.1, Jun 2021
Base Pairs2,901,681,843
Golden Path Length2,901,681,843
Annotation providerEnsembl
Annotation methodFull genebuild
Genebuild startedFeb 2023
Genebuild released
Genebuild last updated/patchedNov 2023
Database version116.1

Gene counts

Coding genes23,217
Non coding genes35,133
Small non coding genes2,663
Long non coding genes32,450
Misc non coding genes20
Pseudogenes457
Gene transcripts98,904