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Pig (Sscrofa11.1) ▼

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Search Pig (Sus scrofa)

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Genome assembly: Sscrofa11.1 (GCA_000003025.6)

More information and statistics

Download DNA sequence (FASTA)

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Other reference assemblies

Other breeds

This species has data on 20 additional breeds. View list of breeds

Example gene Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download FASTA files for genes, cDNAs, ncRNA, proteins

Download GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analysis

Download alignments (EMF)

Example variant Example phenotype Example structural variant

Variation

What can I find? Short sequence variants and longer structural variants; disease and other phenotypes

More about variation in Ensembl

Download all variants (GVF)

Variant Effect Predictor

Example regulatory feature

Regulation

What can I find? Regulatory features like enhancers and promoters, and regulatory activity including ATAC-seq and ChIP-seq tracks.

More about the Ensembl regulatory annotation

Experimental data sources

Download all regulatory features (GFF)