Assembly
The CAU-K assembly was submitted by China Agricultural University and last updated on 2021-07-20. The assembly is on the scaffold level, consisting of 34590 contigs assembled into 13384 scaffolds. The N50 size is the length such that 50% of the assembled genome lies in blocks of the N50 size or longer. The N50 length for the contigs is 223517 while the scaffold N50 is 30528819.
Gene annotation
Genome annotation was generated using the Ensembl vertebrate annotation pipeline.
In accordance with the Fort Lauderdale Agreement, please check the publication status of the genome/assembly before publishing any genome-wide analyses using these data.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
| Assembly | CAU-K, INSDC Assembly GCA_019290145.1, Jul 2021 |
| Base Pairs | 2,444,985,074 |
| Golden Path Length | 2,444,985,074 |
| Annotation provider | Ensembl |
| Annotation method | Full genebuild |
| Genebuild started | Jan 2023 |
| Genebuild released | |
| Genebuild last updated/patched | Aug 2023 |
| Database version | 116.1 |
Gene counts
| Coding genes | 22,103 |
| Non coding genes | 17,606 |
| Small non coding genes | 1,929 |
| Long non coding genes | 15,661 |
| Misc non coding genes | 16 |
| Pseudogenes | 951 |
| Gene transcripts | 77,748 |
