Colour legend
| From 100 million | |
| From 10 to 99.9 million | |
| From 1 million to 9.9 million | |
| From 1,000 to 999,999 | |
| From 1 to 999 | |
| No data |
Ensembl Variation - Detailed species data count
List of data counts by category and species - Ensembl 115
Structural variant data
There are currently 10 species with structural variant data in the Ensembl Variation databases:
| Species | Structural variant | (e!114 → e!115) | Supporting evidence | (e!114 → e!115) |
|---|---|---|---|---|
Cattle
Bos taurus
|
18 K | - | 529 K | - |
Dog
Canis lupus familiaris
|
104 K | - | 107 K | - |
Dog - Boxer
Canis lupus familiarisboxer
|
104 K | - | 107 K | - |
Horse
Equus caballus
|
193 K | - | 193 K | - |
Human
Homo sapiens
|
6.8 M | - | 26 M | - |
Mouse
Mus musculus
|
791 K | - | 1.2 M | - |
Pig
Sus scrofa
|
224 K | - | 310 K | - |
Sheep
Ovis aries
|
2 | - | 2 | - |
Sheep - Texel
Ovis aries texel
|
2 | - | 2 | - |
Zebrafish
Danio rerio
|
5 K | - | 29 K | - |
Genotype data
There are currently 2 species with genotype data in the Ensembl Variation databases:
| Species | Variants with sample genotype | (e!113 → e!114) | Variants with population genotype | (e!113 → e!114) |
|---|---|---|---|---|
Platypus
Ornithorhynchus anatinus
|
1.1 M | - | 1.1 M | - |
|
Sheep (texel)
Ovis aries
|
64 | - | 147 | - |
There are currently 16 species with genotype data loaded dynamically from vcf file:
| Species | Variants with sample genotype | (e!113 → e!114) | Variants with population genotype | (e!113 → e!114) |
|---|---|---|---|---|
American mink
Neovison vison
|
- | 34 K | - | |
Atlantic salmon
Salmo salar
|
8 M | - | 8 M | - |
|
Cattle
Bos taurus
|
18 M | - | 18 M | - |
Chicken
Gallus gallus
|
14 M | - | 14 M | - |
|
Dog
Canis lupus familiaris
|
27 M | - | 27 M | - |
|
Dog - Boxer
Canis lupus familiarisboxer
|
29 M | - | 29 M | - |
Goat
Capra hircus
|
31 M | - | 31 M | - |
Great Tit
Parus major
|
497 K | - | 497 K | - |
|
Horse
Equus caballus
|
7.5 M | - | 7.5 M | - |
|
Human
Homo sapiens
|
27 M | - | 1.9 M | - |
|
Mouse
Mus musculus
|
10 M | - | 10 M | - |
Nile tilapia
Oreochromis niloticus
|
- | 63 K | - | |
Rabbit
Oryctolagus cuniculus
|
82 K | - | 82 K | - |
Sheep
Ovis aries rambouillet
|
40 M | - | 40 M | - |
|
Sheep (texel)
Ovis aries
|
46 M | - | 46 M | - |
Vervet-AGM
Chlorocebus sabaeus
|
62 M | - | 62 M | - |
Phenotype data
The list of phenotype/disease/trait association sources by species is available in the page Phenotype sources.
There are currently 15 species with phenotype data in the Ensembl Variation databases:
| Species | Phenotype | (e!114 → e!115) | Phenotype association | (e!114 → e!115) |
|---|---|---|---|---|
Cat - Abyssinian
Felis catus abyssinian
|
105 | - | 106 | - |
|
Cattle
Bos taurus
|
722 | (+9) | 164 K | (+1,000) |
|
Chicken
Gallus gallus
|
256 | - | 16 K | - |
|
Dog
Canis lupus familiaris
|
349 | (+6) | 356 | (+6) |
|
Dog - Boxer
Canis lupus familiarisboxer
|
348 | (+6) | 355 | (+6) |
Domestic cat
Felis catus
|
94 | - | 100 | (+1) |
|
Goat
Capra hircus
|
105 | (+9) | 2 K | (+554) |
|
Horse
Equus caballus
|
108 | (+9) | 2 K | (+213) |
|
Human
Homo sapiens
|
67 K | (+4,000) | 20 M | (+551,000) |
|
Mouse
Mus musculus
|
10 K | (+164) | 256 K | (+6,000) |
Norway rat - BN/NHsdMcwi
Rattus norvegicus
|
12 K | (+74) | 137 K | (+53) |
|
Pig
Sus scrofa
|
464 | (+1) | 51 K | (+1,000) |
|
Sheep
Ovis aries
|
186 | (+16) | 4 K | (+542) |
|
Sheep - Texel
Ovis aries texel
|
87 | - | 744 | - |
|
Zebrafish
Danio rerio
|
27 K | (+493) | 85 K | (+1,000) |
Citation data
There are currently 13 species with citation data in the Ensembl Variation databases:
| Species | Cited sequence variant | (e!114 → e!115) | Publication | (e!114 → e!115) |
|---|---|---|---|---|
|
Cattle
Bos taurus
|
2 K | - | 226 | - |
|
Chicken
Gallus gallus
|
742 | - | 113 | - |
|
Dog
Canis lupus familiaris
|
308 | - | 76 | - |
|
Dog - Boxer
Canis lupus familiarisboxer
|
304 | - | 75 | - |
|
Goat
Capra hircus
|
13 | - | 2 | - |
|
Horse
Equus caballus
|
35 | - | 8 | - |
|
Human
Homo sapiens
|
797 K | (+25,000) | 196 K | (+4,000) |
|
Mouse
Mus musculus
|
8 K | - | 790 | - |
|
Norway rat - BN/NHsdMcwi
Rattus norvegicus
|
90 | - | 19 | - |
|
Pig
Sus scrofa
|
352 | - | 45 | - |
|
Sheep
Ovis aries
|
65 | (-12) | 17 | - |
|
Sheep - Texel
Ovis aries texel
|
77 | - | 17 | - |
|
Zebrafish
Danio rerio
|
29 | - | 6 | - |
Prediction data
There are currently 15 species with prediction data in the Ensembl Variation databases:
| Species | Variants with SIFT data | (e!114 → e!115) | Variants with PolyPhen data | (e!114 → e!115) |
|---|---|---|---|---|
|
Cat - Abyssinian
Felis catus abyssinian
|
7 K | - | 0 | - |
|
Cattle
Bos taurus
|
2.1 M | - | 0 | - |
|
Chicken
Gallus gallus
|
281 K | - | 0 | - |
|
Dog
Canis lupus familiaris
|
172 K | - | 0 | - |
|
Dog - Boxer
Canis lupus familiarisboxer
|
162 K | - | 0 | - |
|
Domestic cat
Felis catus
|
8 K | - | 0 | - |
|
Goat
Capra hircus
|
102 K | - | 0 | - |
|
Horse
Equus caballus
|
351 K | - | 0 | - |
|
Human
Homo sapiens
|
9.7 M | (-20,000) | 9.4 M | (-22,000) |
|
Mouse
Mus musculus
|
640 K | (+306) | 0 | - |
|
Norway rat - BN/NHsdMcwi
Rattus norvegicus
|
32 K | - | 0 | - |
|
Pig
Sus scrofa
|
269 K | - | 0 | - |
|
Sheep
Ovis aries
|
418 K | (+183,000) | 0 | - |
|
Sheep - Texel
Ovis aries texel
|
235 K | - | 0 | - |
|
Zebrafish
Danio rerio
|
89 K | - | 0 | - |
The full list of species with their assembly versions in Ensembl is available here.