Human vs Pig USMARC Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Pig USMARC (Sus scrofa, USMARCv1.0) were extracted from their pairwise alignment in Ensembl release 97. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 481 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 341,721,570 out of 3,096,649,726 |
Uncovered: 965,289 out of 35,628,222 |
| Pig USMARC |
Uncovered: 395,208,977 out of 2,755,438,035 |
Uncovered: 2,123,997 out of 35,166,034 |