Human vs Macaque Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Macaque (Macaca mulatta, Mmul_10) were extracted from their pairwise alignment in Ensembl release 98. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 245 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 274,311,540 out of 3,099,750,718
Covered: 2,825,439,178 out of 3,099,750,718

Uncovered: 258,124 out of 38,571,754
Covered: 38,313,630 out of 38,571,754

Macaque

Uncovered: 164,321,849 out of 2,971,331,530
Covered: 2,807,009,681 out of 2,971,331,530

Uncovered: 384,082 out of 37,308,545
Covered: 36,924,463 out of 37,308,545