Human vs Macaque Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Macaque (Macaca mulatta, Mmul_10) were extracted from their pairwise alignment in Ensembl release 98. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 245 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 271,210,548 out of 3,096,649,726
Covered: 2,825,439,178 out of 3,096,649,726

Uncovered: 222,909 out of 35,628,222
Covered: 35,405,313 out of 35,628,222

Macaque

Uncovered: 164,305,285 out of 2,971,314,966
Covered: 2,807,009,681 out of 2,971,314,966

Uncovered: 372,712 out of 37,297,175
Covered: 36,924,463 out of 37,297,175