Zebrafish vs Gilthead seabream Synteny results
The syntenic regions between Zebrafish (Danio rerio, GRCz11) and Gilthead seabream (Sparus aurata, fSpaAur1.1) were extracted from their pairwise alignment in Ensembl release 99. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 529 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Zebrafish |
Uncovered: 963,382,290 out of 1,373,471,384 |
Uncovered: 32,015,522 out of 42,031,845 |
| Gilthead seabream |
Uncovered: 536,116,631 out of 833,578,411 |
Uncovered: 32,087,459 out of 46,093,722 |