Chicken vs Green anole Synteny results
The syntenic regions between Chicken (Gallus gallus, bGalGal1.mat.broiler.GRCg7b) and Green anole (Anolis carolinensis, AnoCar2.0v2) were extracted from their pairwise alignment in Ensembl release 107. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 757 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Chicken |
Uncovered: 228,527,704 out of 1,053,332,251 |
Uncovered: 11,169,012 out of 31,304,036 |
| Green anole |
Uncovered: 480,051,390 out of 1,799,143,587 |
Uncovered: 13,013,456 out of 37,303,061 |