21 murinae EPO
This alignment has been generated in Ensembl release 105 and is composed of 19,867 blocks (up to 990,194 bp long).
API access
| Species | Assembly | Genome length (bp) | Genome coverage (bp) | Genome coverage (%) | Coding exon length (bp) | Coding exon coverage (bp) | Coding exon coverage (%) |
|---|---|---|---|---|---|---|---|
| Mouse (Mus musculus) | GRCm39 | 2,728,222,451 | 2,436,861,874 | 89.32 | 36,539,344 | 34,522,444 | 94.48 |
| Mouse C57BL/6NJ (Mus musculus) | C57BL_6NJ_v1 | 2,806,783,987 | 2,608,446,226 | 92.93 | 33,844,765 | 32,821,157 | 96.98 |
| Mouse NZO/HlLtJ (Mus musculus) | NZO_HlLtJ_v1 | 2,699,250,994 | 2,511,953,583 | 93.06 | 33,800,914 | 32,857,363 | 97.21 |
| Mouse NOD/ShiLtJ (Mus musculus) | NOD_ShiLtJ_v1 | 2,982,046,949 | 2,722,324,504 | 91.29 | 33,530,182 | 32,450,825 | 96.78 |
| Mouse FVB/NJ (Mus musculus) | FVB_NJ_v1 | 2,588,602,990 | 2,404,777,777 | 92.90 | 33,442,451 | 32,532,765 | 97.28 |
| Mouse AKR/J (Mus musculus) | AKR_J_v1 | 2,712,691,254 | 2,510,312,407 | 92.54 | 33,631,045 | 32,701,548 | 97.24 |
| Mouse CBA/J (Mus musculus) | CBA_J_v1 | 2,921,711,655 | 2,712,663,932 | 92.85 | 33,477,020 | 32,568,047 | 97.28 |
| Mouse C3H/HeJ (Mus musculus) | C3H_HeJ_v1 | 2,701,115,015 | 2,508,376,492 | 92.86 | 33,510,401 | 32,571,834 | 97.20 |
| Mouse DBA/2J (Mus musculus) | DBA_2J_v1 | 2,606,145,858 | 2,423,081,939 | 92.98 | 33,519,382 | 32,568,689 | 97.16 |
| Mouse A/J (Mus musculus) | A_J_v1 | 2,629,979,094 | 2,432,967,890 | 92.51 | 33,590,616 | 32,653,973 | 97.21 |
| Mouse BALB/cJ (Mus musculus) | BALB_cJ_v1 | 2,627,327,954 | 2,440,585,016 | 92.89 | 33,614,618 | 32,668,314 | 97.18 |
| Mouse LP/J (Mus musculus) | LP_J_v1 | 2,730,782,202 | 2,534,100,420 | 92.80 | 33,545,961 | 32,561,349 | 97.06 |
| Mouse 129S1/SvImJ (Mus musculus) | 129S1_SvImJ_v1 | 2,732,657,393 | 2,534,718,747 | 92.76 | 33,592,547 | 32,605,671 | 97.06 |
| Mouse WSB/EiJ (Mus musculus domesticus) | WSB_EiJ_v1 | 2,689,641,256 | 2,500,324,980 | 92.96 | 33,184,284 | 32,343,984 | 97.47 |
| Mouse PWK/PhJ (Mus musculus musculus) | PWK_PhJ_v1 | 2,559,971,091 | 2,399,042,714 | 93.71 | 33,092,319 | 32,116,608 | 97.05 |
| Mouse CAST/EiJ (Mus musculus castaneus) | CAST_EiJ_v1 | 2,653,974,351 | 2,500,949,486 | 94.23 | 33,207,622 | 32,208,528 | 96.99 |
| Algerian mouse (Mus spretus) | SPRET_EiJ_v1 | 2,625,571,169 | 2,451,629,101 | 93.38 | 33,001,570 | 31,851,859 | 96.52 |
| Steppe mouse (Mus spicilegus) | MUSP714 | 2,496,083,520 | 2,178,036,424 | 87.26 | 35,178,654 | 32,039,205 | 91.08 |
| Ryukyu mouse (Mus caroli) | CAROLI_EIJ_v1.1 | 2,553,112,587 | 2,236,960,379 | 87.62 | 32,770,133 | 31,584,325 | 96.38 |
| Shrew mouse (Mus pahari) | PAHARI_EIJ_v1.1 | 2,475,012,951 | 2,176,240,257 | 87.93 | 32,578,444 | 31,197,249 | 95.76 |
| Rat (Rattus norvegicus) | mRatBN7.2 | 2,647,915,728 | 2,334,494,771 | 88.16 | 37,397,693 | 33,777,329 | 90.32 |
Block size distribution
| Size range | All 19,867 alignment blocks | |
|---|---|---|
| # blocks | Total size (incl. gaps) | |
| 10 bp - 100 bp | 1 |
78.0 bp |
| 100 bp - 1 kb | 65 |
32.1 kb |
| 1 kb - 10 kb | 237 |
1.3 Mb |
| 10 kb - 100 kb | 4,362 |
235.2 Mb |
| 100 kb - 1 Mb | 8,830 |
3.2 Gb |
| 1 Mb - 10 Mb | 6,372 |
6.4 Gb |