Painted turtle vs Human Synteny results
The syntenic regions between Painted turtle (Chrysemys picta bellii, Chrysemys_picta_bellii-3.0.3) and Human (Homo sapiens, GRCh38) were extracted from their pairwise alignment in Ensembl release 95. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 980 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Painted turtle |
Uncovered: 745,380,905 out of 2,365,766,571 |
Uncovered: 11,311,934 out of 33,484,189 |
| Human |
Uncovered: 910,022,275 out of 3,096,649,726 |
Uncovered: 11,742,611 out of 35,628,222 |