Horse vs Human Synteny results

The syntenic regions between Horse (Equus caballus, EquCab3.0) and Human (Homo sapiens, GRCh38) were extracted from their pairwise alignment in Ensembl release 95. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 268 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Horse

Uncovered: 133,732,659 out of 2,506,966,135
Covered: 2,373,233,476 out of 2,506,966,135

Uncovered: 963,110 out of 37,559,221
Covered: 36,596,111 out of 37,559,221

Human

Uncovered: 315,696,705 out of 3,096,649,726
Covered: 2,780,953,021 out of 3,096,649,726

Uncovered: 671,583 out of 35,628,222
Covered: 34,956,639 out of 35,628,222