Hybrid - Bos Indicus vs Human Synteny results
The syntenic regions between Hybrid - Bos Indicus (Bos indicus x Bos taurus, UOA_Brahman_1) and Human (Homo sapiens, GRCh38) were extracted from their pairwise alignment in Ensembl release 97. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 357 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Hybrid - Bos Indicus |
Uncovered: 95,706,578 out of 2,680,953,056 |
Uncovered: 710,125 out of 37,484,807 |
| Human |
Uncovered: 334,670,361 out of 3,096,649,726 |
Uncovered: 806,816 out of 35,628,222 |