Human vs Kakapo Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Kakapo (Strigops habroptila, bStrHab1_v1.p) were extracted from their pairwise alignment in Ensembl release 99. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 419 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 945,741,121 out of 3,096,649,726 |
Uncovered: 12,159,123 out of 35,619,351 |
| Kakapo |
Uncovered: 233,901,276 out of 1,165,621,973 |
Uncovered: 6,687,283 out of 26,948,573 |