Human vs Domestic yak Synteny results

The syntenic regions between Human (Homo sapiens, GRCh38) and Domestic yak (Bos grunniens, LU_Bosgru_v3.0) were extracted from their pairwise alignment in Ensembl release 99. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 364 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Human

Uncovered: 408,150,325 out of 3,096,649,726
Covered: 2,688,499,401 out of 3,096,649,726

Uncovered: 1,526,348 out of 35,619,351
Covered: 34,093,003 out of 35,619,351

Domestic yak

Uncovered: 63,745,215 out of 2,832,776,395
Covered: 2,769,031,180 out of 2,832,776,395

Uncovered: 407,926 out of 34,628,786
Covered: 34,220,860 out of 34,628,786