Human vs Zebra finch Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Zebra finch (Taeniopygia guttata, bTaeGut1_v1.p) were extracted from their pairwise alignment in Ensembl release 99. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 421 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 1,080,266,801 out of 3,096,649,726 |
Uncovered: 13,235,816 out of 35,619,351 |
| Zebra finch |
Uncovered: 222,480,159 out of 1,057,995,280 |
Uncovered: 9,354,768 out of 30,887,957 |