Cat vs Lion Synteny results
The syntenic regions between Cat (Felis catus, Felis_catus_9.0) and Lion (Panthera leo, PanLeo1.0) were extracted from their pairwise alignment in Ensembl release 100. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 230 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Cat |
Uncovered: 119,491,913 out of 2,521,863,845 |
Uncovered: 802,155 out of 34,484,742 |
| Lion |
Uncovered: 56,047,394 out of 2,406,807,619 |
Uncovered: 649,967 out of 32,345,482 |