Platypus vs Opossum Synteny results
The syntenic regions between Platypus (Ornithorhynchus anatinus, mOrnAna1.p.v1) and Opossum (Monodelphis domestica, ASM229v1) were extracted from their pairwise alignment in Ensembl release 100. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 620 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Platypus |
Uncovered: 366,018,480 out of 1,858,552,590 |
Uncovered: 10,483,641 out of 31,202,085 |
| Opossum |
Uncovered: 810,894,664 out of 3,600,504,728 |
Uncovered: 11,965,893 out of 35,083,223 |