Human vs Yarkand deer Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and Yarkand deer (Cervus hanglu yarkandensis, CEY_v1) were extracted from their pairwise alignment in Ensembl release 101. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 383 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 335,227,604 out of 3,096,649,726 |
Uncovered: 805,127 out of 35,634,800 |
| Yarkand deer |
Uncovered: 150,319,707 out of 2,594,114,534 |
Uncovered: 1,819,141 out of 35,871,670 |