Human vs White-tufted-ear marmoset Synteny results
The syntenic regions between Human (Homo sapiens, GRCh38) and White-tufted-ear marmoset (Callithrix jacchus, mCalJac1.pat.X) were extracted from their pairwise alignment in Ensembl release 105. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 330 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Human |
Uncovered: 292,145,838 out of 3,096,649,726 |
Uncovered: 497,790 out of 35,703,020 |
| White-tufted-ear marmoset |
Uncovered: 79,076,157 out of 2,829,711,198 |
Uncovered: 404,709 out of 36,931,356 |