Horse vs Donkey Synteny results
The syntenic regions between Horse (Equus caballus, EquCab3.0) and Donkey (Equus asinus, ASM1607732v2) were extracted from their pairwise alignment in Ensembl release 109. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 150 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Horse |
Uncovered: 110,460,335 out of 2,506,966,135 |
Uncovered: 667,576 out of 38,317,516 |
| Donkey |
Uncovered: 46,849,491 out of 2,431,907,375 |
Uncovered: 285,285 out of 35,853,645 |