Mouse vs Naked mole-rat female Synteny results
The syntenic regions between Mouse (Mus musculus, GRCm39) and Naked mole-rat female (Heterocephalus glaber, Naked_mole-rat_maternal) were extracted from their pairwise alignment in Ensembl release 110. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
Configuration parameters
No configuration parameters are available.
Statistics over 540 synteny blocks
| Genome coverage (bp) | Coding exon coverage (bp) | |
|---|---|---|
| Mouse |
Uncovered: 332,527,030 out of 2,728,222,451 |
Uncovered: 2,842,265 out of 36,801,392 |
| Naked mole-rat female |
Uncovered: 108,378,706 out of 2,500,150,894 |
Uncovered: 1,322,426 out of 34,454,808 |