22 murinae EPO
This alignment has been generated in Ensembl release 115 and is composed of 15,506 blocks (up to 999,354 bp long).
API access
| Species | Assembly | Genome length (bp) | Genome coverage (bp) | Genome coverage (%) | Coding exon length (bp) | Coding exon coverage (bp) | Coding exon coverage (%) |
|---|---|---|---|---|---|---|---|
| Mouse (Mus musculus) | GRCm39 | 2,728,222,451 | 2,464,488,602 | 90.33 | 36,945,812 | 35,038,783 | 94.84 |
| Mouse C57BL/6NJ (Mus musculus) | C57BL_6NJ_v3 | 2,514,609,827 | 2,429,845,336 | 96.63 | 35,790,223 | 34,659,359 | 96.84 |
| Mouse NZO/HlLtJ (Mus musculus) | NZO_HlLtJ_v3 | 2,822,921,545 | 2,462,122,395 | 87.22 | 36,491,980 | 34,745,669 | 95.21 |
| Mouse WSB/EiJ (Mus musculus domesticus) | WSB_EiJ_v3 | 2,519,257,335 | 2,403,541,836 | 95.41 | 35,504,683 | 34,267,723 | 96.52 |
| Mouse BALB/cJ (Mus musculus) | BALB_cJ_v3 | 2,519,913,071 | 2,432,286,309 | 96.52 | 35,834,463 | 34,668,009 | 96.74 |
| Mouse NOD/ShiLtJ (Mus musculus) | NOD_ShiLtJ_v3 | 2,517,363,842 | 2,422,861,885 | 96.25 | 35,731,295 | 34,536,077 | 96.65 |
| Mouse DBA/2J (Mus musculus) | DBA_2J_v3 | 2,603,173,076 | 2,454,805,828 | 94.30 | 36,533,929 | 34,983,092 | 95.76 |
| Mouse CBA/J (Mus musculus) | CBA_J_v3 | 2,520,503,294 | 2,430,246,526 | 96.42 | 35,753,260 | 34,619,176 | 96.83 |
| Mouse C3H/HeJ (Mus musculus) | C3H_HeJ_v3 | 2,532,437,443 | 2,429,130,582 | 95.92 | 35,740,515 | 34,594,774 | 96.79 |
| Mouse A/J (Mus musculus) | A_J_v3 | 2,528,261,065 | 2,435,006,220 | 96.31 | 35,814,237 | 34,668,492 | 96.80 |
| Mouse AKR/J (Mus musculus) | AKR_J_v3 | 2,502,437,358 | 2,415,194,398 | 96.51 | 35,688,511 | 34,557,750 | 96.83 |
| Mouse FVB/NJ (Mus musculus) | FVB_NJ_v3 | 2,516,166,698 | 2,397,251,742 | 95.27 | 35,543,534 | 34,340,794 | 96.62 |
| Mouse LP/J (Mus musculus) | LP_J_v3 | 2,856,326,410 | 2,468,139,921 | 86.41 | 36,494,133 | 34,887,337 | 95.60 |
| Mouse 129S1/SvImJ (Mus musculus) | 129S1_SvImJ_v3 | 2,516,264,170 | 2,428,606,083 | 96.52 | 35,655,630 | 34,524,792 | 96.83 |
| Mouse CAST/EiJ (Mus musculus castaneus) | CAST_EiJ_v3 | 2,519,863,764 | 2,398,051,254 | 95.17 | 35,773,011 | 34,381,905 | 96.11 |
| Mouse JF1/MsJ (Mus musculus molossinus) | JF1_MsJ_v3 | 2,727,434,184 | 2,449,152,754 | 89.80 | 36,947,591 | 34,835,689 | 94.28 |
| Mouse PWK/PhJ (Mus musculus musculus) | PWK_PhJ_v3 | 2,507,124,359 | 2,413,209,763 | 96.25 | 35,698,250 | 34,424,529 | 96.43 |
| Western wild mouse (Mus spretus) | SPRET_EiJ_v3 | 2,546,544,085 | 2,416,092,141 | 94.88 | 35,765,005 | 34,179,704 | 95.57 |
| Steppe mouse (Mus spicilegus) | MUSP714 | 2,496,083,520 | 2,194,805,679 | 87.93 | 35,178,654 | 32,320,954 | 91.88 |
| Ryukyu mouse (Mus caroli) | CAROLI_EIJ_v1.1 | 2,553,112,587 | 2,244,651,714 | 87.92 | 32,770,133 | 31,645,363 | 96.57 |
| Shrew mouse (Mus pahari) | PAHARI_EIJ_v1.1 | 2,475,012,951 | 2,184,342,849 | 88.26 | 32,578,444 | 31,373,633 | 96.30 |
| Norway rat - BN/NHsdMcwi (Rattus norvegicus) | GRCr8 | 2,849,597,492 | 2,359,878,008 | 82.81 | 37,775,112 | 34,347,720 | 90.93 |
Block size distribution
| Size range | All 15,506 alignment blocks | |
|---|---|---|
| # blocks | Total size (incl. gaps) | |
| 10 bp - 100 bp | 2 |
135.0 bp |
| 100 bp - 1 kb | 48 |
22.8 kb |
| 1 kb - 10 kb | 285 |
1.6 Mb |
| 10 kb - 100 kb | 5,496 |
277.6 Mb |
| 100 kb - 1 Mb | 6,442 |
2.2 Gb |
| 1 Mb - 10 Mb | 3,233 |
3.2 Gb |